Cluster: HRGMv2_4326_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4326
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4326_2 | HRGMv2_4326_2_24 | 28361 | 28936 | - | 3.D.6.1.2 |
| TC | HRGMv2_4326_2 | HRGMv2_4326_2_25 | 28952 | 29674 | - | 3.D.6.1.2 |
| TC | HRGMv2_4326_2 | HRGMv2_4326_2_26 | 29677 | 30303 | - | 3.D.6.1.2 |
| TC | HRGMv2_4326_2 | HRGMv2_4326_2_27 | 30300 | 31256 | - | 3.D.6.1.2 |
| TC | HRGMv2_4326_2 | HRGMv2_4326_2_28 | 31275 | 32588 | - | 3.D.6.1.2 |
| pfam | HRGMv2_4326_2 | HRGMv2_4326_2_29 | 32861 | 33268 | - | NusG_II |
| CAZyme | HRGMv2_4326_2 | HRGMv2_4326_2_30 | 33240 | 34262 | - | GT2 |
Gene ID: HRGMv2_4326_2_24
Type: TC
Location: 28361 - 28936 (-)
Type: TC
Location: 28361 - 28936 (-)
Gene ID: HRGMv2_4326_2_25
Type: TC
Location: 28952 - 29674 (-)
Type: TC
Location: 28952 - 29674 (-)
Gene ID: HRGMv2_4326_2_26
Type: TC
Location: 29677 - 30303 (-)
Type: TC
Location: 29677 - 30303 (-)
Gene ID: HRGMv2_4326_2_27
Type: TC
Location: 30300 - 31256 (-)
Type: TC
Location: 30300 - 31256 (-)
Gene ID: HRGMv2_4326_2_28
Type: TC
Location: 31275 - 32588 (-)
Type: TC
Location: 31275 - 32588 (-)
Gene ID: HRGMv2_4326_2_29
Type: pfam
Location: 32861 - 33268 (-)
Type: pfam
Location: 32861 - 33268 (-)
Gene ID: HRGMv2_4326_2_30
Type: CAZyme
Location: 33240 - 34262 (-)
Type: CAZyme
Location: 33240 - 34262 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.