Cluster: HRGMv2_4326_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4326
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4326_1 | HRGMv2_4326_1_393 | 382817 | 383995 | + | 3.D.10.1.4 |
| pfam | HRGMv2_4326_1 | HRGMv2_4326_1_394 | 384041 | 384916 | + | QRPTase_C | QRPTase_N |
| TF | HRGMv2_4326_1 | HRGMv2_4326_1_395 | 384938 | 385477 | + | HTH_11 |
| CAZyme | HRGMv2_4326_1 | HRGMv2_4326_1_396 | 385537 | 387204 | - | GH13_31 |
Gene ID: HRGMv2_4326_1_393
Type: TC
Location: 382817 - 383995 (+)
Type: TC
Location: 382817 - 383995 (+)
Gene ID: HRGMv2_4326_1_394
Type: pfam
Location: 384041 - 384916 (+)
Type: pfam
Location: 384041 - 384916 (+)
Gene ID: HRGMv2_4326_1_395
Type: TF
Location: 384938 - 385477 (+)
Type: TF
Location: 384938 - 385477 (+)
Gene ID: HRGMv2_4326_1_396
Type: CAZyme
Location: 385537 - 387204 (-)
Type: CAZyme
Location: 385537 - 387204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.