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Cluster: HRGMv2_4326_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4326_17 HRGMv2_4326_17_2 416 2596 - GH36
TC HRGMv2_4326_17 HRGMv2_4326_17_3 2780 3637 - 3.A.1.1.45
TC HRGMv2_4326_17 HRGMv2_4326_17_4 3637 4578 - 3.A.1.1.45
pfam HRGMv2_4326_17 HRGMv2_4326_17_5 4653 5933 - SBP_bac_8
TC HRGMv2_4326_17 HRGMv2_4326_17_6 6350 7039 + 9.B.28.1.8
NULL(UNKNOWN) HRGMv2_4326_17 HRGMv2_4326_17_7 7158 7925 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_4326_17 HRGMv2_4326_17_8 8046 9023 - LacI
CAZyme HRGMv2_4326_17 HRGMv2_4326_17_9 9129 10688 - GH32
pfam HRGMv2_4326_17 HRGMv2_4326_17_10 11146 13125 + Bmp
pfam HRGMv2_4326_17 HRGMv2_4326_17_11 13122 13733 + Metallophos | Metallophos_2
TC HRGMv2_4326_17 HRGMv2_4326_17_12 13894 15003 + 3.A.1.1.26
Gene ID: HRGMv2_4326_17_2
Type: CAZyme
Location: 416 - 2596 (-)
Gene ID: HRGMv2_4326_17_3
Type: TC
Location: 2780 - 3637 (-)
Gene ID: HRGMv2_4326_17_4
Type: TC
Location: 3637 - 4578 (-)
Gene ID: HRGMv2_4326_17_5
Type: pfam
Location: 4653 - 5933 (-)
Gene ID: HRGMv2_4326_17_6
Type: TC
Location: 6350 - 7039 (+)
Gene ID: HRGMv2_4326_17_7
Type:
Location: 7158 - 7925 (+)
Gene ID: HRGMv2_4326_17_8
Type: TF
Location: 8046 - 9023 (-)
Gene ID: HRGMv2_4326_17_9
Type: CAZyme
Location: 9129 - 10688 (-)
Gene ID: HRGMv2_4326_17_10
Type: pfam
Location: 11146 - 13125 (+)
Gene ID: HRGMv2_4326_17_11
Type: pfam
Location: 13122 - 13733 (+)
Gene ID: HRGMv2_4326_17_12
Type: TC
Location: 13894 - 15003 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerobutyricum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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