Cluster: HRGMv2_4326_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4326
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4326_13 | HRGMv2_4326_13_49 | 54956 | 56440 | + | GH32 |
| pfam | HRGMv2_4326_13 | HRGMv2_4326_13_50 | 56597 | 57601 | + | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| pfam | HRGMv2_4326_13 | HRGMv2_4326_13_51 | 57832 | 59181 | + | Radical_SAM |
| TC | HRGMv2_4326_13 | HRGMv2_4326_13_52 | 59290 | 61722 | + | 3.A.3.23.2 |
Gene ID: HRGMv2_4326_13_49
Type: CAZyme
Location: 54956 - 56440 (+)
Type: CAZyme
Location: 54956 - 56440 (+)
Gene ID: HRGMv2_4326_13_50
Type: pfam
Location: 56597 - 57601 (+)
Type: pfam
Location: 56597 - 57601 (+)
Gene ID: HRGMv2_4326_13_51
Type: pfam
Location: 57832 - 59181 (+)
Type: pfam
Location: 57832 - 59181 (+)
Gene ID: HRGMv2_4326_13_52
Type: TC
Location: 59290 - 61722 (+)
Type: TC
Location: 59290 - 61722 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.