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Cluster: HRGMv2_4326_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4326_11 HRGMv2_4326_11_70 74691 75989 - GH13_20
STP HRGMv2_4326_11 HRGMv2_4326_11_71 76175 76411 - PTS-HPr
TC HRGMv2_4326_11 HRGMv2_4326_11_72 76813 77607 + 3.A.1.3.25
TC HRGMv2_4326_11 HRGMv2_4326_11_73 77626 78294 + 3.A.1.3.25
TC HRGMv2_4326_11 HRGMv2_4326_11_74 78294 79031 + 3.A.1.3.25
pfam HRGMv2_4326_11 HRGMv2_4326_11_75 79134 79901 + AA_kinase
pfam HRGMv2_4326_11 HRGMv2_4326_11_76 80008 81264 + Aldedh
TC HRGMv2_4326_11 HRGMv2_4326_11_77 81374 82675 + 3.A.1.121.4
Gene ID: HRGMv2_4326_11_70
Type: CAZyme
Location: 74691 - 75989 (-)
Gene ID: HRGMv2_4326_11_71
Type: STP
Location: 76175 - 76411 (-)
Gene ID: HRGMv2_4326_11_72
Type: TC
Location: 76813 - 77607 (+)
Gene ID: HRGMv2_4326_11_73
Type: TC
Location: 77626 - 78294 (+)
Gene ID: HRGMv2_4326_11_74
Type: TC
Location: 78294 - 79031 (+)
Gene ID: HRGMv2_4326_11_75
Type: pfam
Location: 79134 - 79901 (+)
Gene ID: HRGMv2_4326_11_76
Type: pfam
Location: 80008 - 81264 (+)
Gene ID: HRGMv2_4326_11_77
Type: TC
Location: 81374 - 82675 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerobutyricum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4326_11_73 vegan > omnivore 2.65325 0.01598

🧭 Explore Read Mapping of CGC

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