Cluster: HRGMv2_4326_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4326
- CGC Family ID: CGCFAM_00204
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4326_7 | HRGMv2_4326_7_48 | 49513 | 51591 | - | GH42 |
| TF | HRGMv2_4326_7 | HRGMv2_4326_7_49 | 51781 | 52158 | + | GntR |
| TC | HRGMv2_4326_7 | HRGMv2_4326_7_50 | 52174 | 53043 | + | 3.A.1.149.1 |
| pfam | HRGMv2_4326_7 | HRGMv2_4326_7_51 | 53058 | 53711 | + | ABC2_membrane_5 |
| TC | HRGMv2_4326_7 | HRGMv2_4326_7_52 | 53764 | 55077 | - | 5.A.1.2.1 |
Gene ID: HRGMv2_4326_7_48
Type: CAZyme
Location: 49513 - 51591 (-)
Type: CAZyme
Location: 49513 - 51591 (-)
Gene ID: HRGMv2_4326_7_49
Type: TF
Location: 51781 - 52158 (+)
Type: TF
Location: 51781 - 52158 (+)
Gene ID: HRGMv2_4326_7_50
Type: TC
Location: 52174 - 53043 (+)
Type: TC
Location: 52174 - 53043 (+)
Gene ID: HRGMv2_4326_7_51
Type: pfam
Location: 53058 - 53711 (+)
Type: pfam
Location: 53058 - 53711 (+)
Gene ID: HRGMv2_4326_7_52
Type: TC
Location: 53764 - 55077 (-)
Type: TC
Location: 53764 - 55077 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.