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Cluster: HRGMv2_4325_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_3 HRGMv2_4325_3_165 189771 190973 - 2.A.55.3.2
STP HRGMv2_4325_3 HRGMv2_4325_3_166 191095 192333 - Aminotran_1_2
pfam HRGMv2_4325_3 HRGMv2_4325_3_167 192529 193713 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
CAZyme HRGMv2_4325_3 HRGMv2_4325_3_168 193916 196342 - GH31_4
TC HRGMv2_4325_3 HRGMv2_4325_3_169 196384 197214 - 3.A.1.1.18
TC HRGMv2_4325_3 HRGMv2_4325_3_170 197214 198089 - 3.A.1.1.7
TC HRGMv2_4325_3 HRGMv2_4325_3_171 198232 200049 + 9.B.33.1.1
Gene ID: HRGMv2_4325_3_165
Type: TC
Location: 189771 - 190973 (-)
Gene ID: HRGMv2_4325_3_166
Type: STP
Location: 191095 - 192333 (-)
Gene ID: HRGMv2_4325_3_167
Type: pfam
Location: 192529 - 193713 (+)
Gene ID: HRGMv2_4325_3_168
Type: CAZyme
Location: 193916 - 196342 (-)
Gene ID: HRGMv2_4325_3_169
Type: TC
Location: 196384 - 197214 (-)
Gene ID: HRGMv2_4325_3_170
Type: TC
Location: 197214 - 198089 (-)
Gene ID: HRGMv2_4325_3_171
Type: TC
Location: 198232 - 200049 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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