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Cluster: HRGMv2_4325_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_2 HRGMv2_4325_2_208 228628 230355 - 3.A.6.3.1
STP HRGMv2_4325_2 HRGMv2_4325_2_209 230627 231691 - Aminotran_1_2
CAZyme HRGMv2_4325_2 HRGMv2_4325_2_210 231925 233595 - GH13_31
pfam HRGMv2_4325_2 HRGMv2_4325_2_211 233610 234281 - Hydrolase | HAD_2
TC HRGMv2_4325_2 HRGMv2_4325_2_212 234268 235101 - 3.A.1.1.34
TC HRGMv2_4325_2 HRGMv2_4325_2_213 235115 236035 - 3.A.1.1.4
STP HRGMv2_4325_2 HRGMv2_4325_2_214 236142 237410 - SBP_bac_1
CAZyme HRGMv2_4325_2 HRGMv2_4325_2_215 237508 239856 - GH65
Gene ID: HRGMv2_4325_2_208
Type: TC
Location: 228628 - 230355 (-)
Gene ID: HRGMv2_4325_2_209
Type: STP
Location: 230627 - 231691 (-)
Gene ID: HRGMv2_4325_2_210
Type: CAZyme
Location: 231925 - 233595 (-)
Gene ID: HRGMv2_4325_2_211
Type: pfam
Location: 233610 - 234281 (-)
Gene ID: HRGMv2_4325_2_212
Type: TC
Location: 234268 - 235101 (-)
Gene ID: HRGMv2_4325_2_213
Type: TC
Location: 235115 - 236035 (-)
Gene ID: HRGMv2_4325_2_214
Type: STP
Location: 236142 - 237410 (-)
Gene ID: HRGMv2_4325_2_215
Type: CAZyme
Location: 237508 - 239856 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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