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Cluster: HRGMv2_4325_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_2 HRGMv2_4325_2_128 143707 144372 - 9.B.28.1.2
CAZyme HRGMv2_4325_2 HRGMv2_4325_2_129 144447 145169 - CE4
TC HRGMv2_4325_2 HRGMv2_4325_2_130 145313 145939 - 2.A.115.2.14
TC HRGMv2_4325_2 HRGMv2_4325_2_131 145994 146704 - 3.A.1.4.10
TC HRGMv2_4325_2 HRGMv2_4325_2_132 146717 147475 - 3.A.1.4.10
TC HRGMv2_4325_2 HRGMv2_4325_2_133 147478 148551 - 3.A.1.4.8
TC HRGMv2_4325_2 HRGMv2_4325_2_134 148562 149446 - 3.A.1.4.10
Gene ID: HRGMv2_4325_2_128
Type: TC
Location: 143707 - 144372 (-)
Gene ID: HRGMv2_4325_2_129
Type: CAZyme
Location: 144447 - 145169 (-)
Gene ID: HRGMv2_4325_2_130
Type: TC
Location: 145313 - 145939 (-)
Gene ID: HRGMv2_4325_2_131
Type: TC
Location: 145994 - 146704 (-)
Gene ID: HRGMv2_4325_2_132
Type: TC
Location: 146717 - 147475 (-)
Gene ID: HRGMv2_4325_2_133
Type: TC
Location: 147478 - 148551 (-)
Gene ID: HRGMv2_4325_2_134
Type: TC
Location: 148562 - 149446 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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