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Cluster: HRGMv2_4325_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4325_2 HRGMv2_4325_2_69 70928 72256 - GH29
CAZyme HRGMv2_4325_2 HRGMv2_4325_2_70 72302 73771 - GH29
CAZyme HRGMv2_4325_2 HRGMv2_4325_2_71 73771 75018 - GH29
TC HRGMv2_4325_2 HRGMv2_4325_2_72 75064 75903 - 3.A.1.1.41
TC HRGMv2_4325_2 HRGMv2_4325_2_73 75946 76839 - 3.A.1.1.20
Gene ID: HRGMv2_4325_2_69
Type: CAZyme
Location: 70928 - 72256 (-)
Gene ID: HRGMv2_4325_2_70
Type: CAZyme
Location: 72302 - 73771 (-)
Gene ID: HRGMv2_4325_2_71
Type: CAZyme
Location: 73771 - 75018 (-)
Gene ID: HRGMv2_4325_2_72
Type: TC
Location: 75064 - 75903 (-)
Gene ID: HRGMv2_4325_2_73
Type: TC
Location: 75946 - 76839 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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