Cluster: HRGMv2_4325_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4325
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4325_18 | HRGMv2_4325_18_20 | 24022 | 25185 | - | 3.B.1.1.5 |
| peptidase | HRGMv2_4325_18 | HRGMv2_4325_18_21 | 25500 | 26735 | - | S11.UNW |
| CAZyme | HRGMv2_4325_18 | HRGMv2_4325_18_22 | 26993 | 28852 | + | GT2 | GT2 |
| CAZyme | HRGMv2_4325_18 | HRGMv2_4325_18_23 | 28862 | 29815 | + | GT2 |
| TC | HRGMv2_4325_18 | HRGMv2_4325_18_24 | 29933 | 31333 | + | 9.B.18.1.1 |
| pfam | HRGMv2_4325_18 | HRGMv2_4325_18_25 | 31351 | 32928 | + | LytR_cpsA_psr |
| CAZyme | HRGMv2_4325_18 | HRGMv2_4325_18_26 | 33028 | 33948 | + | GT2 |
Gene ID: HRGMv2_4325_18_20
Type: TC
Location: 24022 - 25185 (-)
Type: TC
Location: 24022 - 25185 (-)
Gene ID: HRGMv2_4325_18_21
Type: peptidase
Location: 25500 - 26735 (-)
Type: peptidase
Location: 25500 - 26735 (-)
Gene ID: HRGMv2_4325_18_22
Type: CAZyme
Location: 26993 - 28852 (+)
Type: CAZyme
Location: 26993 - 28852 (+)
Gene ID: HRGMv2_4325_18_23
Type: CAZyme
Location: 28862 - 29815 (+)
Type: CAZyme
Location: 28862 - 29815 (+)
Gene ID: HRGMv2_4325_18_24
Type: TC
Location: 29933 - 31333 (+)
Type: TC
Location: 29933 - 31333 (+)
Gene ID: HRGMv2_4325_18_25
Type: pfam
Location: 31351 - 32928 (+)
Type: pfam
Location: 31351 - 32928 (+)
Gene ID: HRGMv2_4325_18_26
Type: CAZyme
Location: 33028 - 33948 (+)
Type: CAZyme
Location: 33028 - 33948 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4325_18_23 | vegan > omnivore | 1.21085 | 0.03605 |