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Cluster: HRGMv2_4325_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4325_1 HRGMv2_4325_1_466 494478 496322 - GH13_11
pfam HRGMv2_4325_1 HRGMv2_4325_1_467 496389 497144 - Exo_endo_phos
TC HRGMv2_4325_1 HRGMv2_4325_1_468 497492 498820 + 9.A.40.2.2
Gene ID: HRGMv2_4325_1_466
Type: CAZyme
Location: 494478 - 496322 (-)
Gene ID: HRGMv2_4325_1_467
Type: pfam
Location: 496389 - 497144 (-)
Gene ID: HRGMv2_4325_1_468
Type: TC
Location: 497492 - 498820 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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