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Cluster: HRGMv2_4325_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_16 HRGMv2_4325_16_42 46033 47643 + 3.A.1.5.11
TC HRGMv2_4325_16 HRGMv2_4325_16_43 47808 48728 + 3.A.1.5.11
TC HRGMv2_4325_16 HRGMv2_4325_16_44 48740 49642 + 3.A.1.5.11
TC HRGMv2_4325_16 HRGMv2_4325_16_45 49655 50638 + 3.A.1.5.15
TC HRGMv2_4325_16 HRGMv2_4325_16_46 50644 51627 + 3.A.1.5.20
CAZyme HRGMv2_4325_16 HRGMv2_4325_16_47 51653 52963 + GH29
TF HRGMv2_4325_16 HRGMv2_4325_16_48 53048 53809 + HTH_DeoR
TC HRGMv2_4325_16 HRGMv2_4325_16_49 53857 54609 + 9.B.158.1.1
Gene ID: HRGMv2_4325_16_42
Type: TC
Location: 46033 - 47643 (+)
Gene ID: HRGMv2_4325_16_43
Type: TC
Location: 47808 - 48728 (+)
Gene ID: HRGMv2_4325_16_44
Type: TC
Location: 48740 - 49642 (+)
Gene ID: HRGMv2_4325_16_45
Type: TC
Location: 49655 - 50638 (+)
Gene ID: HRGMv2_4325_16_46
Type: TC
Location: 50644 - 51627 (+)
Gene ID: HRGMv2_4325_16_47
Type: CAZyme
Location: 51653 - 52963 (+)
Gene ID: HRGMv2_4325_16_48
Type: TF
Location: 53048 - 53809 (+)
Gene ID: HRGMv2_4325_16_49
Type: TC
Location: 53857 - 54609 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Blautia_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4325_16_44 vegan > omnivore 1.39010 0.03605

🧭 Explore Read Mapping of CGC

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