Cluster: HRGMv2_4325_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4325
- CGC Family ID: CGCFAM_06580
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4325_13 | HRGMv2_4325_13_68 | 66738 | 68411 | + | GH18 |
| TC | HRGMv2_4325_13 | HRGMv2_4325_13_69 | 68747 | 70186 | - | 2.A.38.1.1 |
| TC | HRGMv2_4325_13 | HRGMv2_4325_13_70 | 70198 | 71556 | - | 2.A.38.1.1 |
| pfam | HRGMv2_4325_13 | HRGMv2_4325_13_71 | 71806 | 72726 | + | MS_channel_2nd | MS_channel_1st_1 | MS_channel_3rd |
| TC | HRGMv2_4325_13 | HRGMv2_4325_13_72 | 72856 | 73407 | + | 3.A.1.25.5 |
| pfam | HRGMv2_4325_13 | HRGMv2_4325_13_73 | 73432 | 73878 | + | DUF1284 |
| TF | HRGMv2_4325_13 | HRGMv2_4325_13_74 | 73884 | 74894 | + | 0035607 |
| CAZyme | HRGMv2_4325_13 | HRGMv2_4325_13_75 | 74992 | 77640 | + | CBM67 | GH78 |
| STP | HRGMv2_4325_13 | HRGMv2_4325_13_76 | 77778 | 79103 | + | SBP_bac_1 |
| TC | HRGMv2_4325_13 | HRGMv2_4325_13_77 | 79167 | 80027 | + | 3.A.1.1.42 |
| TC | HRGMv2_4325_13 | HRGMv2_4325_13_78 | 80029 | 80859 | + | 3.A.1.1.41 |
| TC | HRGMv2_4325_13 | HRGMv2_4325_13_79 | 81018 | 82811 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_4325_13_68
Type: CAZyme
Location: 66738 - 68411 (+)
Type: CAZyme
Location: 66738 - 68411 (+)
Gene ID: HRGMv2_4325_13_69
Type: TC
Location: 68747 - 70186 (-)
Type: TC
Location: 68747 - 70186 (-)
Gene ID: HRGMv2_4325_13_70
Type: TC
Location: 70198 - 71556 (-)
Type: TC
Location: 70198 - 71556 (-)
Gene ID: HRGMv2_4325_13_71
Type: pfam
Location: 71806 - 72726 (+)
Type: pfam
Location: 71806 - 72726 (+)
Gene ID: HRGMv2_4325_13_72
Type: TC
Location: 72856 - 73407 (+)
Type: TC
Location: 72856 - 73407 (+)
Gene ID: HRGMv2_4325_13_73
Type: pfam
Location: 73432 - 73878 (+)
Type: pfam
Location: 73432 - 73878 (+)
Gene ID: HRGMv2_4325_13_74
Type: TF
Location: 73884 - 74894 (+)
Type: TF
Location: 73884 - 74894 (+)
Gene ID: HRGMv2_4325_13_75
Type: CAZyme
Location: 74992 - 77640 (+)
Type: CAZyme
Location: 74992 - 77640 (+)
Gene ID: HRGMv2_4325_13_76
Type: STP
Location: 77778 - 79103 (+)
Type: STP
Location: 77778 - 79103 (+)
Gene ID: HRGMv2_4325_13_77
Type: TC
Location: 79167 - 80027 (+)
Type: TC
Location: 79167 - 80027 (+)
Gene ID: HRGMv2_4325_13_78
Type: TC
Location: 80029 - 80859 (+)
Type: TC
Location: 80029 - 80859 (+)
Gene ID: HRGMv2_4325_13_79
Type: TC
Location: 81018 - 82811 (+)
Type: TC
Location: 81018 - 82811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.