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Cluster: HRGMv2_4325_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_13 HRGMv2_4325_13_49 47772 49586 + 3.A.16.1.2
CAZyme HRGMv2_4325_13 HRGMv2_4325_13_50 49887 51995 + GH13_39
TC HRGMv2_4325_13 HRGMv2_4325_13_51 52123 52941 + 3.A.1.3.5
TC HRGMv2_4325_13 HRGMv2_4325_13_52 53047 53694 + 3.A.1.3.15
TC HRGMv2_4325_13 HRGMv2_4325_13_53 53707 54468 + 3.A.1.3.10
Gene ID: HRGMv2_4325_13_49
Type: TC
Location: 47772 - 49586 (+)
Gene ID: HRGMv2_4325_13_50
Type: CAZyme
Location: 49887 - 51995 (+)
Gene ID: HRGMv2_4325_13_51
Type: TC
Location: 52123 - 52941 (+)
Gene ID: HRGMv2_4325_13_52
Type: TC
Location: 53047 - 53694 (+)
Gene ID: HRGMv2_4325_13_53
Type: TC
Location: 53707 - 54468 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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