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Cluster: HRGMv2_4325_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4325_6 HRGMv2_4325_6_111 121308 122411 + CE9
CAZyme HRGMv2_4325_6 HRGMv2_4325_6_112 122563 123930 + CE4
CAZyme HRGMv2_4325_6 HRGMv2_4325_6_113 124174 125529 + GH13_20
CAZyme HRGMv2_4325_6 HRGMv2_4325_6_114 125556 127442 + CBM48 | GH13_9
NULL(UNKNOWN) HRGMv2_4325_6 HRGMv2_4325_6_115 127599 127832 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4325_6 HRGMv2_4325_6_116 128020 129204 + 9.B.10.1.1
Gene ID: HRGMv2_4325_6_111
Type: CAZyme
Location: 121308 - 122411 (+)
Gene ID: HRGMv2_4325_6_112
Type: CAZyme
Location: 122563 - 123930 (+)
Gene ID: HRGMv2_4325_6_113
Type: CAZyme
Location: 124174 - 125529 (+)
Gene ID: HRGMv2_4325_6_114
Type: CAZyme
Location: 125556 - 127442 (+)
Gene ID: HRGMv2_4325_6_115
Type:
Location: 127599 - 127832 (+)
Gene ID: HRGMv2_4325_6_116
Type: TC
Location: 128020 - 129204 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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