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Cluster: HRGMv2_4325_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_4 HRGMv2_4325_4_207 226989 228401 + 8.A.59.2.1
TC HRGMv2_4325_4 HRGMv2_4325_4_208 228572 229612 + 3.A.1.2.14
TC HRGMv2_4325_4 HRGMv2_4325_4_209 229820 231346 + 3.A.1.2.23
TC HRGMv2_4325_4 HRGMv2_4325_4_210 231339 232403 + 3.A.1.2.25
TC HRGMv2_4325_4 HRGMv2_4325_4_211 232400 233410 + 3.A.1.2.14
pfam HRGMv2_4325_4 HRGMv2_4325_4_212 233475 234974 + AraA_N | Arabinose_Iso_C | AraA_central
pfam HRGMv2_4325_4 HRGMv2_4325_4_213 235013 236617 + FGGY_N | FGGY_C
CAZyme HRGMv2_4325_4 HRGMv2_4325_4_214 236865 238994 - GH13_11
CAZyme HRGMv2_4325_4 HRGMv2_4325_4_215 239019 241415 - GT4
TC HRGMv2_4325_4 HRGMv2_4325_4_216 241439 242689 - 2.A.40.1.1
Gene ID: HRGMv2_4325_4_207
Type: TC
Location: 226989 - 228401 (+)
Gene ID: HRGMv2_4325_4_208
Type: TC
Location: 228572 - 229612 (+)
Gene ID: HRGMv2_4325_4_209
Type: TC
Location: 229820 - 231346 (+)
Gene ID: HRGMv2_4325_4_210
Type: TC
Location: 231339 - 232403 (+)
Gene ID: HRGMv2_4325_4_211
Type: TC
Location: 232400 - 233410 (+)
Gene ID: HRGMv2_4325_4_212
Type: pfam
Location: 233475 - 234974 (+)
Gene ID: HRGMv2_4325_4_213
Type: pfam
Location: 235013 - 236617 (+)
Gene ID: HRGMv2_4325_4_214
Type: CAZyme
Location: 236865 - 238994 (-)
Gene ID: HRGMv2_4325_4_215
Type: CAZyme
Location: 239019 - 241415 (-)
Gene ID: HRGMv2_4325_4_216
Type: TC
Location: 241439 - 242689 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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