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Cluster: HRGMv2_4325_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4325_4 HRGMv2_4325_4_135 151840 152739 + 3.A.1.1.20
TC HRGMv2_4325_4 HRGMv2_4325_4_136 152757 153605 + 3.A.1.1.20
CAZyme HRGMv2_4325_4 HRGMv2_4325_4_137 153643 155121 + GH32
Gene ID: HRGMv2_4325_4_135
Type: TC
Location: 151840 - 152739 (+)
Gene ID: HRGMv2_4325_4_136
Type: TC
Location: 152757 - 153605 (+)
Gene ID: HRGMv2_4325_4_137
Type: CAZyme
Location: 153643 - 155121 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4325_4_136 vegan > omnivore 1.78826 0.03605

🧭 Explore Read Mapping of CGC

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