Cluster: HRGMv2_4324_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4324
- CGC Family ID: CGCFAM_10592
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4324_8 | HRGMv2_4324_8_1 | 2 | 1849 | - | GH5_1 |
| CAZyme | HRGMv2_4324_8 | HRGMv2_4324_8_2 | 1905 | 3977 | - | CBM48 | GH13_9 |
| pfam | HRGMv2_4324_8 | HRGMv2_4324_8_3 | 4214 | 4978 | - | DHquinase_I |
| pfam | HRGMv2_4324_8 | HRGMv2_4324_8_4 | 4990 | 5874 | - | Shikimate_dh_N | SDH_C |
| TC | HRGMv2_4324_8 | HRGMv2_4324_8_5 | 6033 | 6734 | - | 2.A.115.2.10 |
Gene ID: HRGMv2_4324_8_1
Type: CAZyme
Location: 2 - 1849 (-)
Type: CAZyme
Location: 2 - 1849 (-)
Gene ID: HRGMv2_4324_8_2
Type: CAZyme
Location: 1905 - 3977 (-)
Type: CAZyme
Location: 1905 - 3977 (-)
Gene ID: HRGMv2_4324_8_3
Type: pfam
Location: 4214 - 4978 (-)
Type: pfam
Location: 4214 - 4978 (-)
Gene ID: HRGMv2_4324_8_4
Type: pfam
Location: 4990 - 5874 (-)
Type: pfam
Location: 4990 - 5874 (-)
Gene ID: HRGMv2_4324_8_5
Type: TC
Location: 6033 - 6734 (-)
Type: TC
Location: 6033 - 6734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3212
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.