Cluster: HRGMv2_4324_CGC6
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_4324
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_30 | 39666 | 42473 | - | GH73 |
| TC | HRGMv2_4324_4 | HRGMv2_4324_4_31 | 42486 | 43496 | - | 3.A.1.17.8 |
| STP | HRGMv2_4324_4 | HRGMv2_4324_4_32 | 43568 | 46507 | - | EAL | GGDEF | SBP_bac_3 | SBP_bac_3 |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_33 | 46646 | 47269 | + | SPOB_a |
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_34 | 47339 | 48655 | - | GH13_20 |
| peptidase | HRGMv2_4324_4 | HRGMv2_4324_4_35 | 48731 | 50515 | - | M03.UPB |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_36 | 50539 | 51078 | - | Isochorismatase |
| TC | HRGMv2_4324_4 | HRGMv2_4324_4_37 | 51106 | 52047 | - | 2.A.69.3.4 |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_38 | 52101 | 52853 | - | Exo_endo_phos |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_39 | 52967 | 53767 | + | Acetyltransf_1 |
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_40 | 53769 | 54797 | - | GT2 |
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_41 | 54823 | 55899 | - | GT2 |
| TC | HRGMv2_4324_4 | HRGMv2_4324_4_42 | 55889 | 57451 | - | 2.A.66.1.40 |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_43 | 57466 | 58587 | - | DUF4832 | DUF4874 |
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_44 | 58685 | 59512 | - | GT2 |
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_45 | 59526 | 60728 | - | GT4 |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_46 | 60740 | 61129 | - | DUF2304 |
| pfam | HRGMv2_4324_4 | HRGMv2_4324_4_47 | 61156 | 62598 | - | PelG |
| CAZyme | HRGMv2_4324_4 | HRGMv2_4324_4_48 | 62602 | 64062 | - | GT4 |
Gene ID: HRGMv2_4324_4_30
Type: CAZyme
Location: 39666 - 42473 (-)
Type: CAZyme
Location: 39666 - 42473 (-)
Gene ID: HRGMv2_4324_4_31
Type: TC
Location: 42486 - 43496 (-)
Type: TC
Location: 42486 - 43496 (-)
Gene ID: HRGMv2_4324_4_32
Type: STP
Location: 43568 - 46507 (-)
Type: STP
Location: 43568 - 46507 (-)
Gene ID: HRGMv2_4324_4_33
Type: pfam
Location: 46646 - 47269 (+)
Type: pfam
Location: 46646 - 47269 (+)
Gene ID: HRGMv2_4324_4_34
Type: CAZyme
Location: 47339 - 48655 (-)
Type: CAZyme
Location: 47339 - 48655 (-)
Gene ID: HRGMv2_4324_4_35
Type: peptidase
Location: 48731 - 50515 (-)
Type: peptidase
Location: 48731 - 50515 (-)
Gene ID: HRGMv2_4324_4_36
Type: pfam
Location: 50539 - 51078 (-)
Type: pfam
Location: 50539 - 51078 (-)
Gene ID: HRGMv2_4324_4_37
Type: TC
Location: 51106 - 52047 (-)
Type: TC
Location: 51106 - 52047 (-)
Gene ID: HRGMv2_4324_4_38
Type: pfam
Location: 52101 - 52853 (-)
Type: pfam
Location: 52101 - 52853 (-)
Gene ID: HRGMv2_4324_4_39
Type: pfam
Location: 52967 - 53767 (+)
Type: pfam
Location: 52967 - 53767 (+)
Gene ID: HRGMv2_4324_4_40
Type: CAZyme
Location: 53769 - 54797 (-)
Type: CAZyme
Location: 53769 - 54797 (-)
Gene ID: HRGMv2_4324_4_41
Type: CAZyme
Location: 54823 - 55899 (-)
Type: CAZyme
Location: 54823 - 55899 (-)
Gene ID: HRGMv2_4324_4_42
Type: TC
Location: 55889 - 57451 (-)
Type: TC
Location: 55889 - 57451 (-)
Gene ID: HRGMv2_4324_4_43
Type: pfam
Location: 57466 - 58587 (-)
Type: pfam
Location: 57466 - 58587 (-)
Gene ID: HRGMv2_4324_4_44
Type: CAZyme
Location: 58685 - 59512 (-)
Type: CAZyme
Location: 58685 - 59512 (-)
Gene ID: HRGMv2_4324_4_45
Type: CAZyme
Location: 59526 - 60728 (-)
Type: CAZyme
Location: 59526 - 60728 (-)
Gene ID: HRGMv2_4324_4_46
Type: pfam
Location: 60740 - 61129 (-)
Type: pfam
Location: 60740 - 61129 (-)
Gene ID: HRGMv2_4324_4_47
Type: pfam
Location: 61156 - 62598 (-)
Type: pfam
Location: 61156 - 62598 (-)
Gene ID: HRGMv2_4324_4_48
Type: CAZyme
Location: 62602 - 64062 (-)
Type: CAZyme
Location: 62602 - 64062 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3212
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.