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Cluster: HRGMv2_4324_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4324_37 HRGMv2_4324_37_3 2201 4555 - GH10
peptidase HRGMv2_4324_37 HRGMv2_4324_37_4 4878 5762 + C82.UPA
pfam HRGMv2_4324_37 HRGMv2_4324_37_5 5763 6413 + RNase_H | Cauli_VI
CAZyme HRGMv2_4324_37 HRGMv2_4324_37_6 6482 7249 + CE4
TC HRGMv2_4324_37 HRGMv2_4324_37_7 7351 8295 - 1.A.35.3.1
NULL(UNKNOWN) HRGMv2_4324_37 HRGMv2_4324_37_8 8757 8972 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4324_37 HRGMv2_4324_37_9 9541 10623 - Big_2 | Big_2 | Big-like
CAZyme HRGMv2_4324_37 HRGMv2_4324_37_10 10862 12916 - GH13_39
TC HRGMv2_4324_37 HRGMv2_4324_37_11 13325 15238 - 3.A.16.1.1
Gene ID: HRGMv2_4324_37_3
Type: CAZyme
Location: 2201 - 4555 (-)
Gene ID: HRGMv2_4324_37_4
Type: peptidase
Location: 4878 - 5762 (+)
Gene ID: HRGMv2_4324_37_5
Type: pfam
Location: 5763 - 6413 (+)
Gene ID: HRGMv2_4324_37_6
Type: CAZyme
Location: 6482 - 7249 (+)
Gene ID: HRGMv2_4324_37_7
Type: TC
Location: 7351 - 8295 (-)
Gene ID: HRGMv2_4324_37_8
Type:
Location: 8757 - 8972 (-)
Gene ID: HRGMv2_4324_37_9
Type: pfam
Location: 9541 - 10623 (-)
Gene ID: HRGMv2_4324_37_10
Type: CAZyme
Location: 10862 - 12916 (-)
Gene ID: HRGMv2_4324_37_11
Type: TC
Location: 13325 - 15238 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UBA3212
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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