Cluster: HRGMv2_4324_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4324
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4324_31 | HRGMv2_4324_31_24 | 19852 | 20691 | + | 8.A.5.1.4 |
| TF | HRGMv2_4324_31 | HRGMv2_4324_31_25 | 20776 | 21207 | + | MarR |
| TC | HRGMv2_4324_31 | HRGMv2_4324_31_26 | 21194 | 22540 | + | 2.A.66.1.37 |
| peptidase | HRGMv2_4324_31 | HRGMv2_4324_31_27 | 22680 | 23639 | + | C51.001 |
| CAZyme | HRGMv2_4324_31 | HRGMv2_4324_31_28 | 23936 | 27928 | + | GH43_4 |
Gene ID: HRGMv2_4324_31_24
Type: TC
Location: 19852 - 20691 (+)
Type: TC
Location: 19852 - 20691 (+)
Gene ID: HRGMv2_4324_31_25
Type: TF
Location: 20776 - 21207 (+)
Type: TF
Location: 20776 - 21207 (+)
Gene ID: HRGMv2_4324_31_26
Type: TC
Location: 21194 - 22540 (+)
Type: TC
Location: 21194 - 22540 (+)
Gene ID: HRGMv2_4324_31_27
Type: peptidase
Location: 22680 - 23639 (+)
Type: peptidase
Location: 22680 - 23639 (+)
Gene ID: HRGMv2_4324_31_28
Type: CAZyme
Location: 23936 - 27928 (+)
Type: CAZyme
Location: 23936 - 27928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3212
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.