Cluster: HRGMv2_4324_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4324
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4324_21 | HRGMv2_4324_21_7 | 7068 | 7814 | + | GT26 |
| pfam | HRGMv2_4324_21 | HRGMv2_4324_21_8 | 7843 | 8448 | + | Hexapep |
| CAZyme | HRGMv2_4324_21 | HRGMv2_4324_21_9 | 8516 | 9649 | + | GT4 |
| pfam | HRGMv2_4324_21 | HRGMv2_4324_21_10 | 9663 | 10925 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_4324_21 | HRGMv2_4324_21_11 | 10956 | 12476 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_4324_21_7
Type: CAZyme
Location: 7068 - 7814 (+)
Type: CAZyme
Location: 7068 - 7814 (+)
Gene ID: HRGMv2_4324_21_8
Type: pfam
Location: 7843 - 8448 (+)
Type: pfam
Location: 7843 - 8448 (+)
Gene ID: HRGMv2_4324_21_9
Type: CAZyme
Location: 8516 - 9649 (+)
Type: CAZyme
Location: 8516 - 9649 (+)
Gene ID: HRGMv2_4324_21_10
Type: pfam
Location: 9663 - 10925 (+)
Type: pfam
Location: 9663 - 10925 (+)
Gene ID: HRGMv2_4324_21_11
Type: TC
Location: 10956 - 12476 (+)
Type: TC
Location: 10956 - 12476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3212
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.