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Cluster: HRGMv2_4324_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4324_18 HRGMv2_4324_18_13 12372 13886 - GH77
pfam HRGMv2_4324_18 HRGMv2_4324_18_14 14102 15559 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam HRGMv2_4324_18 HRGMv2_4324_18_15 15964 19146 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_4324_18 HRGMv2_4324_18_16 19207 21666 + GT35
pfam HRGMv2_4324_18 HRGMv2_4324_18_17 21782 22714 + SpoIID
STP HRGMv2_4324_18 HRGMv2_4324_18_18 22781 23614 + Peptidase_M23
TC HRGMv2_4324_18 HRGMv2_4324_18_19 23715 24491 - 1.C.113.1.3
pfam HRGMv2_4324_18 HRGMv2_4324_18_20 24748 25137 + FMN_bind
TC HRGMv2_4324_18 HRGMv2_4324_18_21 25215 26075 + 2.A.115.1.1
TC HRGMv2_4324_18 HRGMv2_4324_18_22 26102 27460 + 2.A.66.1.33
Gene ID: HRGMv2_4324_18_13
Type: CAZyme
Location: 12372 - 13886 (-)
Gene ID: HRGMv2_4324_18_14
Type: pfam
Location: 14102 - 15559 (+)
Gene ID: HRGMv2_4324_18_15
Type: pfam
Location: 15964 - 19146 (+)
Gene ID: HRGMv2_4324_18_16
Type: CAZyme
Location: 19207 - 21666 (+)
Gene ID: HRGMv2_4324_18_17
Type: pfam
Location: 21782 - 22714 (+)
Gene ID: HRGMv2_4324_18_18
Type: STP
Location: 22781 - 23614 (+)
Gene ID: HRGMv2_4324_18_19
Type: TC
Location: 23715 - 24491 (-)
Gene ID: HRGMv2_4324_18_20
Type: pfam
Location: 24748 - 25137 (+)
Gene ID: HRGMv2_4324_18_21
Type: TC
Location: 25215 - 26075 (+)
Gene ID: HRGMv2_4324_18_22
Type: TC
Location: 26102 - 27460 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UBA3212
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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