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Cluster: HRGMv2_4324_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4324_9 HRGMv2_4324_9_13 18568 20985 - GT4
pfam HRGMv2_4324_9 HRGMv2_4324_9_14 20936 22105 - Glyphos_transf
CAZyme HRGMv2_4324_9 HRGMv2_4324_9_15 22113 22940 - GT2
TC HRGMv2_4324_9 HRGMv2_4324_9_16 22973 24364 - 9.B.18.1.3
pfam HRGMv2_4324_9 HRGMv2_4324_9_17 24387 24827 - GtrA_DPMS_TM
pfam HRGMv2_4324_9 HRGMv2_4324_9_18 25183 26727 + LytR_cpsA_psr
CAZyme HRGMv2_4324_9 HRGMv2_4324_9_19 26812 27876 + GT28
pfam HRGMv2_4324_9 HRGMv2_4324_9_20 27935 28342 - HIT | DcpS_C
TC HRGMv2_4324_9 HRGMv2_4324_9_21 28421 29452 - 9.B.104.1.3
Gene ID: HRGMv2_4324_9_13
Type: CAZyme
Location: 18568 - 20985 (-)
Gene ID: HRGMv2_4324_9_14
Type: pfam
Location: 20936 - 22105 (-)
Gene ID: HRGMv2_4324_9_15
Type: CAZyme
Location: 22113 - 22940 (-)
Gene ID: HRGMv2_4324_9_16
Type: TC
Location: 22973 - 24364 (-)
Gene ID: HRGMv2_4324_9_17
Type: pfam
Location: 24387 - 24827 (-)
Gene ID: HRGMv2_4324_9_18
Type: pfam
Location: 25183 - 26727 (+)
Gene ID: HRGMv2_4324_9_19
Type: CAZyme
Location: 26812 - 27876 (+)
Gene ID: HRGMv2_4324_9_20
Type: pfam
Location: 27935 - 28342 (-)
Gene ID: HRGMv2_4324_9_21
Type: TC
Location: 28421 - 29452 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UBA3212
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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