Cluster: HRGMv2_4322_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4322
- CGC Family ID: CGCFAM_00472
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4322_42 | HRGMv2_4322_42_5 | 5284 | 7329 | + | GH13_11 |
| CAZyme | HRGMv2_4322_42 | HRGMv2_4322_42_6 | 7400 | 9883 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_4322_42 | HRGMv2_4322_42_7 | 9923 | 11641 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_4322_42 | HRGMv2_4322_42_8 | 11802 | 12479 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4322_42 | HRGMv2_4322_42_9 | 12881 | 15169 | + | 3.A.6.3.1 |
Gene ID: HRGMv2_4322_42_5
Type: CAZyme
Location: 5284 - 7329 (+)
Type: CAZyme
Location: 5284 - 7329 (+)
Gene ID: HRGMv2_4322_42_6
Type: CAZyme
Location: 7400 - 9883 (+)
Type: CAZyme
Location: 7400 - 9883 (+)
Gene ID: HRGMv2_4322_42_7
Type: CAZyme
Location: 9923 - 11641 (+)
Type: CAZyme
Location: 9923 - 11641 (+)
Gene ID: HRGMv2_4322_42_8
Type:
Location: 11802 - 12479 (-)
Type:
Location: 11802 - 12479 (-)
Gene ID: HRGMv2_4322_42_9
Type: TC
Location: 12881 - 15169 (+)
Type: TC
Location: 12881 - 15169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oribacterium
Species
Oribacterium sp934279105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.