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Cluster: HRGMv2_4322_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4322_11 HRGMv2_4322_11_8 8382 9227 - 3.A.1.1.18
TC HRGMv2_4322_11 HRGMv2_4322_11_9 9220 10125 - 3.A.1.1.11
TC HRGMv2_4322_11 HRGMv2_4322_11_10 10211 11527 - 3.A.1.1.28
STP HRGMv2_4322_11 HRGMv2_4322_11_11 11626 12603 - SIS
TC HRGMv2_4322_11 HRGMv2_4322_11_12 13513 14877 - 2.A.66.1.33
CAZyme HRGMv2_4322_11 HRGMv2_4322_11_13 15115 17631 - GH31_2
CAZyme HRGMv2_4322_11 HRGMv2_4322_11_14 17803 20298 - GH31_2
TC HRGMv2_4322_11 HRGMv2_4322_11_15 20437 21624 - 2.A.56.1.5
TC HRGMv2_4322_11 HRGMv2_4322_11_16 21624 22112 - 2.A.56.1.5
TC HRGMv2_4322_11 HRGMv2_4322_11_17 22340 23395 - 2.A.56.1.5
Gene ID: HRGMv2_4322_11_8
Type: TC
Location: 8382 - 9227 (-)
Gene ID: HRGMv2_4322_11_9
Type: TC
Location: 9220 - 10125 (-)
Gene ID: HRGMv2_4322_11_10
Type: TC
Location: 10211 - 11527 (-)
Gene ID: HRGMv2_4322_11_11
Type: STP
Location: 11626 - 12603 (-)
Gene ID: HRGMv2_4322_11_12
Type: TC
Location: 13513 - 14877 (-)
Gene ID: HRGMv2_4322_11_13
Type: CAZyme
Location: 15115 - 17631 (-)
Gene ID: HRGMv2_4322_11_14
Type: CAZyme
Location: 17803 - 20298 (-)
Gene ID: HRGMv2_4322_11_15
Type: TC
Location: 20437 - 21624 (-)
Gene ID: HRGMv2_4322_11_16
Type: TC
Location: 21624 - 22112 (-)
Gene ID: HRGMv2_4322_11_17
Type: TC
Location: 22340 - 23395 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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