Cluster: HRGMv2_4322_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4322
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4322_100 | HRGMv2_4322_100_2 | 1485 | 2534 | + | GT2 |
| TC | HRGMv2_4322_100 | HRGMv2_4322_100_3 | 2467 | 3921 | - | 2.A.66.2.23 |
| CAZyme | HRGMv2_4322_100 | HRGMv2_4322_100_4 | 3918 | 4898 | - | GT2 |
| pfam | HRGMv2_4322_100 | HRGMv2_4322_100_5 | 4880 | 6040 | - | Glycos_transf_2 | Glyco_tranf_2_3 |
| NULL(UNKNOWN) | HRGMv2_4322_100 | HRGMv2_4322_100_6 | 6070 | 7017 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4322_100 | HRGMv2_4322_100_7 | 7034 | 7999 | - | GT8 |
Gene ID: HRGMv2_4322_100_2
Type: CAZyme
Location: 1485 - 2534 (+)
Type: CAZyme
Location: 1485 - 2534 (+)
Gene ID: HRGMv2_4322_100_3
Type: TC
Location: 2467 - 3921 (-)
Type: TC
Location: 2467 - 3921 (-)
Gene ID: HRGMv2_4322_100_4
Type: CAZyme
Location: 3918 - 4898 (-)
Type: CAZyme
Location: 3918 - 4898 (-)
Gene ID: HRGMv2_4322_100_5
Type: pfam
Location: 4880 - 6040 (-)
Type: pfam
Location: 4880 - 6040 (-)
Gene ID: HRGMv2_4322_100_6
Type:
Location: 6070 - 7017 (-)
Type:
Location: 6070 - 7017 (-)
Gene ID: HRGMv2_4322_100_7
Type: CAZyme
Location: 7034 - 7999 (-)
Type: CAZyme
Location: 7034 - 7999 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oribacterium
Species
Oribacterium sp934279105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.