dbCAN Logo

Cluster: HRGMv2_4322_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4322_87 HRGMv2_4322_87_1 323 1111 - 2.A.5.5.2
pfam HRGMv2_4322_87 HRGMv2_4322_87_2 1309 2154 + Lipase_GDSL_2
pfam HRGMv2_4322_87 HRGMv2_4322_87_3 2618 3925 - CbiD
TC HRGMv2_4322_87 HRGMv2_4322_87_4 3961 4788 - 3.A.1.14.1
TC HRGMv2_4322_87 HRGMv2_4322_87_5 4788 5783 - 3.A.1.13.2
STP HRGMv2_4322_87 HRGMv2_4322_87_6 5977 7803 - Peripla_BP_2 | Peripla_BP_2
pfam HRGMv2_4322_87 HRGMv2_4322_87_7 7874 8482 - TK
CAZyme HRGMv2_4322_87 HRGMv2_4322_87_8 8485 8940 - GH3
Gene ID: HRGMv2_4322_87_1
Type: TC
Location: 323 - 1111 (-)
Gene ID: HRGMv2_4322_87_2
Type: pfam
Location: 1309 - 2154 (+)
Gene ID: HRGMv2_4322_87_3
Type: pfam
Location: 2618 - 3925 (-)
Gene ID: HRGMv2_4322_87_4
Type: TC
Location: 3961 - 4788 (-)
Gene ID: HRGMv2_4322_87_5
Type: TC
Location: 4788 - 5783 (-)
Gene ID: HRGMv2_4322_87_6
Type: STP
Location: 5977 - 7803 (-)
Gene ID: HRGMv2_4322_87_7
Type: pfam
Location: 7874 - 8482 (-)
Gene ID: HRGMv2_4322_87_8
Type: CAZyme
Location: 8485 - 8940 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List