Cluster: HRGMv2_4320_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_00010
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4320_18 | HRGMv2_4320_18_1 | 345 | 1880 | - | GH77 |
| TF | HRGMv2_4320_18 | HRGMv2_4320_18_2 | 1873 | 2901 | - | LacI |
| TC | HRGMv2_4320_18 | HRGMv2_4320_18_3 | 2928 | 3833 | - | 3.A.1.1.45 |
| TC | HRGMv2_4320_18 | HRGMv2_4320_18_4 | 3833 | 4690 | - | 3.A.1.1.45 |
| TC | HRGMv2_4320_18 | HRGMv2_4320_18_5 | 4759 | 5778 | - | 3.A.1.1.45 |
| TC | HRGMv2_4320_18 | HRGMv2_4320_18_6 | 5808 | 6170 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_4320_18_1
Type: CAZyme
Location: 345 - 1880 (-)
Type: CAZyme
Location: 345 - 1880 (-)
Gene ID: HRGMv2_4320_18_2
Type: TF
Location: 1873 - 2901 (-)
Type: TF
Location: 1873 - 2901 (-)
Gene ID: HRGMv2_4320_18_3
Type: TC
Location: 2928 - 3833 (-)
Type: TC
Location: 2928 - 3833 (-)
Gene ID: HRGMv2_4320_18_4
Type: TC
Location: 3833 - 4690 (-)
Type: TC
Location: 3833 - 4690 (-)
Gene ID: HRGMv2_4320_18_5
Type: TC
Location: 4759 - 5778 (-)
Type: TC
Location: 4759 - 5778 (-)
Gene ID: HRGMv2_4320_18_6
Type: TC
Location: 5808 - 6170 (-)
Type: TC
Location: 5808 - 6170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.