Cluster: HRGMv2_4320_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_09957
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4320_15 | HRGMv2_4320_15_35 | 31478 | 33658 | - | GH65 |
| NULL(UNKNOWN) | HRGMv2_4320_15 | HRGMv2_4320_15_36 | 33661 | 33759 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4320_15 | HRGMv2_4320_15_37 | 33756 | 35969 | - | GH65 |
| TC | HRGMv2_4320_15 | HRGMv2_4320_15_38 | 35979 | 36899 | - | 3.A.1.1.47 |
| TC | HRGMv2_4320_15 | HRGMv2_4320_15_39 | 36915 | 37793 | - | 3.A.1.1.20 |
| STP | HRGMv2_4320_15 | HRGMv2_4320_15_40 | 37939 | 39393 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4320_15 | HRGMv2_4320_15_41 | 39773 | 44470 | - | CBM82 | CBM83 | GH13_41 |
Gene ID: HRGMv2_4320_15_35
Type: CAZyme
Location: 31478 - 33658 (-)
Type: CAZyme
Location: 31478 - 33658 (-)
Gene ID: HRGMv2_4320_15_36
Type:
Location: 33661 - 33759 (-)
Type:
Location: 33661 - 33759 (-)
Gene ID: HRGMv2_4320_15_37
Type: CAZyme
Location: 33756 - 35969 (-)
Type: CAZyme
Location: 33756 - 35969 (-)
Gene ID: HRGMv2_4320_15_38
Type: TC
Location: 35979 - 36899 (-)
Type: TC
Location: 35979 - 36899 (-)
Gene ID: HRGMv2_4320_15_39
Type: TC
Location: 36915 - 37793 (-)
Type: TC
Location: 36915 - 37793 (-)
Gene ID: HRGMv2_4320_15_40
Type: STP
Location: 37939 - 39393 (-)
Type: STP
Location: 37939 - 39393 (-)
Gene ID: HRGMv2_4320_15_41
Type: CAZyme
Location: 39773 - 44470 (-)
Type: CAZyme
Location: 39773 - 44470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.