Cluster: HRGMv2_4320_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4320
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4320_106 | HRGMv2_4320_106_7 | 7442 | 8239 | + | 2.A.79.1.5 |
| pfam | HRGMv2_4320_106 | HRGMv2_4320_106_8 | 8236 | 8682 | + | ThrE | ThrE_2 |
| CAZyme | HRGMv2_4320_106 | HRGMv2_4320_106_9 | 8679 | 9989 | - | GH13_20 |
| pfam | HRGMv2_4320_106 | HRGMv2_4320_106_10 | 10009 | 10815 | - | F420_oxidored | P5CR_dimer |
| CAZyme | HRGMv2_4320_106 | HRGMv2_4320_106_11 | 11050 | 12462 | + | CBM65 | GH5_8 |
| TC | HRGMv2_4320_106 | HRGMv2_4320_106_12 | 12710 | 14062 | + | 1.B.52.2.1 |
Gene ID: HRGMv2_4320_106_7
Type: TC
Location: 7442 - 8239 (+)
Type: TC
Location: 7442 - 8239 (+)
Gene ID: HRGMv2_4320_106_8
Type: pfam
Location: 8236 - 8682 (+)
Type: pfam
Location: 8236 - 8682 (+)
Gene ID: HRGMv2_4320_106_9
Type: CAZyme
Location: 8679 - 9989 (-)
Type: CAZyme
Location: 8679 - 9989 (-)
Gene ID: HRGMv2_4320_106_10
Type: pfam
Location: 10009 - 10815 (-)
Type: pfam
Location: 10009 - 10815 (-)
Gene ID: HRGMv2_4320_106_11
Type: CAZyme
Location: 11050 - 12462 (+)
Type: CAZyme
Location: 11050 - 12462 (+)
Gene ID: HRGMv2_4320_106_12
Type: TC
Location: 12710 - 14062 (+)
Type: TC
Location: 12710 - 14062 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.