Cluster: HRGMv2_4320_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_10588
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4320_102 | HRGMv2_4320_102_10 | 9722 | 10702 | - | 3.A.1.2.21 |
| TC | HRGMv2_4320_102 | HRGMv2_4320_102_11 | 10704 | 11792 | - | 1.B.52.2.2 |
| STP | HRGMv2_4320_102 | HRGMv2_4320_102_12 | 11786 | 12706 | - | dCache_1 |
| CAZyme | HRGMv2_4320_102 | HRGMv2_4320_102_13 | 12849 | 14195 | - | GH18 |
| CAZyme | HRGMv2_4320_102 | HRGMv2_4320_102_14 | 14149 | 15606 | - | GH18 |
| sulfatase | HRGMv2_4320_102 | HRGMv2_4320_102_15 | 16011 | 16745 | + | S1_9 |
| CAZyme | HRGMv2_4320_102 | HRGMv2_4320_102_16 | 16767 | 17888 | + | CE9 |
Gene ID: HRGMv2_4320_102_10
Type: TC
Location: 9722 - 10702 (-)
Type: TC
Location: 9722 - 10702 (-)
Gene ID: HRGMv2_4320_102_11
Type: TC
Location: 10704 - 11792 (-)
Type: TC
Location: 10704 - 11792 (-)
Gene ID: HRGMv2_4320_102_12
Type: STP
Location: 11786 - 12706 (-)
Type: STP
Location: 11786 - 12706 (-)
Gene ID: HRGMv2_4320_102_13
Type: CAZyme
Location: 12849 - 14195 (-)
Type: CAZyme
Location: 12849 - 14195 (-)
Gene ID: HRGMv2_4320_102_14
Type: CAZyme
Location: 14149 - 15606 (-)
Type: CAZyme
Location: 14149 - 15606 (-)
Gene ID: HRGMv2_4320_102_15
Type: sulfatase
Location: 16011 - 16745 (+)
Type: sulfatase
Location: 16011 - 16745 (+)
Gene ID: HRGMv2_4320_102_16
Type: CAZyme
Location: 16767 - 17888 (+)
Type: CAZyme
Location: 16767 - 17888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.