Cluster: HRGMv2_4320_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_07087
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4320_73 | HRGMv2_4320_73_2 | 1333 | 2271 | + | GH113 |
| TC | HRGMv2_4320_73 | HRGMv2_4320_73_3 | 2284 | 4074 | + | 3.A.1.106.2 |
| pfam | HRGMv2_4320_73 | HRGMv2_4320_73_4 | 4198 | 5919 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| STP | HRGMv2_4320_73 | HRGMv2_4320_73_5 | 5923 | 6561 | + | NUDIX |
| CAZyme | HRGMv2_4320_73 | HRGMv2_4320_73_6 | 6612 | 8813 | + | GH36 |
Gene ID: HRGMv2_4320_73_2
Type: CAZyme
Location: 1333 - 2271 (+)
Type: CAZyme
Location: 1333 - 2271 (+)
Gene ID: HRGMv2_4320_73_3
Type: TC
Location: 2284 - 4074 (+)
Type: TC
Location: 2284 - 4074 (+)
Gene ID: HRGMv2_4320_73_4
Type: pfam
Location: 4198 - 5919 (+)
Type: pfam
Location: 4198 - 5919 (+)
Gene ID: HRGMv2_4320_73_5
Type: STP
Location: 5923 - 6561 (+)
Type: STP
Location: 5923 - 6561 (+)
Gene ID: HRGMv2_4320_73_6
Type: CAZyme
Location: 6612 - 8813 (+)
Type: CAZyme
Location: 6612 - 8813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.