Cluster: HRGMv2_4320_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_02722
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4320_58 | HRGMv2_4320_58_80 | 56171 | 58849 | + | GH13_28 |
| pfam | HRGMv2_4320_58 | HRGMv2_4320_58_81 | 59098 | 59976 | + | PBP_like_2 | PBP_like_2 |
| TC | HRGMv2_4320_58 | HRGMv2_4320_58_82 | 60067 | 60933 | + | 3.A.1.7.5 |
| TC | HRGMv2_4320_58 | HRGMv2_4320_58_83 | 60930 | 61790 | + | 3.A.1.7.5 |
| TC | HRGMv2_4320_58 | HRGMv2_4320_58_84 | 61818 | 62582 | + | 3.A.1.7.5 |
Gene ID: HRGMv2_4320_58_80
Type: CAZyme
Location: 56171 - 58849 (+)
Type: CAZyme
Location: 56171 - 58849 (+)
Gene ID: HRGMv2_4320_58_81
Type: pfam
Location: 59098 - 59976 (+)
Type: pfam
Location: 59098 - 59976 (+)
Gene ID: HRGMv2_4320_58_82
Type: TC
Location: 60067 - 60933 (+)
Type: TC
Location: 60067 - 60933 (+)
Gene ID: HRGMv2_4320_58_83
Type: TC
Location: 60930 - 61790 (+)
Type: TC
Location: 60930 - 61790 (+)
Gene ID: HRGMv2_4320_58_84
Type: TC
Location: 61818 - 62582 (+)
Type: TC
Location: 61818 - 62582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.