Cluster: HRGMv2_4320_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4320
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4320_58 | HRGMv2_4320_58_57 | 34097 | 34312 | + | 1.E.18.1.3 |
| CAZyme | HRGMv2_4320_58 | HRGMv2_4320_58_58 | 34316 | 35176 | + | GH24 |
| pfam | HRGMv2_4320_58 | HRGMv2_4320_58_59 | 35341 | 35832 | + | SocA_Panacea |
| NULL(UNKNOWN) | HRGMv2_4320_58 | HRGMv2_4320_58_60 | 35847 | 36815 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4320_58 | HRGMv2_4320_58_61 | 37153 | 38673 | + | 1.B.52.2.1 |
| NULL(UNKNOWN) | HRGMv2_4320_58 | HRGMv2_4320_58_62 | 38775 | 39125 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4320_58 | HRGMv2_4320_58_63 | 39160 | 40551 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_4320_58_57
Type: TC
Location: 34097 - 34312 (+)
Type: TC
Location: 34097 - 34312 (+)
Gene ID: HRGMv2_4320_58_58
Type: CAZyme
Location: 34316 - 35176 (+)
Type: CAZyme
Location: 34316 - 35176 (+)
Gene ID: HRGMv2_4320_58_59
Type: pfam
Location: 35341 - 35832 (+)
Type: pfam
Location: 35341 - 35832 (+)
Gene ID: HRGMv2_4320_58_60
Type:
Location: 35847 - 36815 (+)
Type:
Location: 35847 - 36815 (+)
Gene ID: HRGMv2_4320_58_61
Type: TC
Location: 37153 - 38673 (+)
Type: TC
Location: 37153 - 38673 (+)
Gene ID: HRGMv2_4320_58_62
Type:
Location: 38775 - 39125 (+)
Type:
Location: 38775 - 39125 (+)
Gene ID: HRGMv2_4320_58_63
Type: TC
Location: 39160 - 40551 (+)
Type: TC
Location: 39160 - 40551 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.