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Cluster: HRGMv2_4320_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4320_57 HRGMv2_4320_57_3 2929 3909 + 2.A.86.1.11
NULL(UNKNOWN) HRGMv2_4320_57 HRGMv2_4320_57_4 4099 6585 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4320_57 HRGMv2_4320_57_5 6606 8498 + CBM48 | GH13_9
pfam HRGMv2_4320_57 HRGMv2_4320_57_6 8674 9000 + P-II
pfam HRGMv2_4320_57 HRGMv2_4320_57_7 9013 9348 + P-II
TC HRGMv2_4320_57 HRGMv2_4320_57_8 9365 10138 + 3.A.1.17.4
TC HRGMv2_4320_57 HRGMv2_4320_57_9 10209 11261 + 3.A.1.17.4
TC HRGMv2_4320_57 HRGMv2_4320_57_10 11282 12082 + 3.A.1.17.4
Gene ID: HRGMv2_4320_57_3
Type: TC
Location: 2929 - 3909 (+)
Gene ID: HRGMv2_4320_57_4
Type:
Location: 4099 - 6585 (+)
Gene ID: HRGMv2_4320_57_5
Type: CAZyme
Location: 6606 - 8498 (+)
Gene ID: HRGMv2_4320_57_6
Type: pfam
Location: 8674 - 9000 (+)
Gene ID: HRGMv2_4320_57_7
Type: pfam
Location: 9013 - 9348 (+)
Gene ID: HRGMv2_4320_57_8
Type: TC
Location: 9365 - 10138 (+)
Gene ID: HRGMv2_4320_57_9
Type: TC
Location: 10209 - 11261 (+)
Gene ID: HRGMv2_4320_57_10
Type: TC
Location: 11282 - 12082 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Petralouisia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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