Cluster: HRGMv2_4320_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4320_56 | HRGMv2_4320_56_31 | 26688 | 28121 | + | 3.A.1.103.6 |
| TC | HRGMv2_4320_56 | HRGMv2_4320_56_32 | 28134 | 28856 | + | 3.A.1.103.1 |
| pfam | HRGMv2_4320_56 | HRGMv2_4320_56_33 | 28869 | 29357 | + | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| NULL(UNKNOWN) | HRGMv2_4320_56 | HRGMv2_4320_56_34 | 29462 | 30271 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4320_56 | HRGMv2_4320_56_35 | 30286 | 33270 | + | GT2 |
Gene ID: HRGMv2_4320_56_31
Type: TC
Location: 26688 - 28121 (+)
Type: TC
Location: 26688 - 28121 (+)
Gene ID: HRGMv2_4320_56_32
Type: TC
Location: 28134 - 28856 (+)
Type: TC
Location: 28134 - 28856 (+)
Gene ID: HRGMv2_4320_56_33
Type: pfam
Location: 28869 - 29357 (+)
Type: pfam
Location: 28869 - 29357 (+)
Gene ID: HRGMv2_4320_56_34
Type:
Location: 29462 - 30271 (+)
Type:
Location: 29462 - 30271 (+)
Gene ID: HRGMv2_4320_56_35
Type: CAZyme
Location: 30286 - 33270 (+)
Type: CAZyme
Location: 30286 - 33270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.