Cluster: HRGMv2_4320_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_00270
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4320_55 | HRGMv2_4320_55_1 | 3 | 575 | + | 3.A.1.11.8 |
| TC | HRGMv2_4320_55 | HRGMv2_4320_55_2 | 562 | 1263 | + | 3.A.1.11.8 |
| TC | HRGMv2_4320_55 | HRGMv2_4320_55_3 | 1256 | 2077 | + | 3.A.1.11.1 |
| TC | HRGMv2_4320_55 | HRGMv2_4320_55_4 | 2071 | 2859 | + | 3.A.1.11.8 |
| TC | HRGMv2_4320_55 | HRGMv2_4320_55_5 | 2883 | 3317 | + | 3.A.1.11.7 |
| TC | HRGMv2_4320_55 | HRGMv2_4320_55_6 | 3311 | 3940 | + | 3.A.1.11.1 |
| pfam | HRGMv2_4320_55 | HRGMv2_4320_55_7 | 4099 | 5004 | + | DUF5688 |
| CAZyme | HRGMv2_4320_55 | HRGMv2_4320_55_8 | 5024 | 6466 | - | GT5 |
Gene ID: HRGMv2_4320_55_1
Type: TC
Location: 3 - 575 (+)
Type: TC
Location: 3 - 575 (+)
Gene ID: HRGMv2_4320_55_2
Type: TC
Location: 562 - 1263 (+)
Type: TC
Location: 562 - 1263 (+)
Gene ID: HRGMv2_4320_55_3
Type: TC
Location: 1256 - 2077 (+)
Type: TC
Location: 1256 - 2077 (+)
Gene ID: HRGMv2_4320_55_4
Type: TC
Location: 2071 - 2859 (+)
Type: TC
Location: 2071 - 2859 (+)
Gene ID: HRGMv2_4320_55_5
Type: TC
Location: 2883 - 3317 (+)
Type: TC
Location: 2883 - 3317 (+)
Gene ID: HRGMv2_4320_55_6
Type: TC
Location: 3311 - 3940 (+)
Type: TC
Location: 3311 - 3940 (+)
Gene ID: HRGMv2_4320_55_7
Type: pfam
Location: 4099 - 5004 (+)
Type: pfam
Location: 4099 - 5004 (+)
Gene ID: HRGMv2_4320_55_8
Type: CAZyme
Location: 5024 - 6466 (-)
Type: CAZyme
Location: 5024 - 6466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.