Cluster: HRGMv2_4320_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: beta-mannan
- Genome ID: HRGMv2_4320
- CGC Family ID: CGCFAM_01490
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4320_34 | HRGMv2_4320_34_1 | 3 | 878 | + | CBM27 |
| CAZyme | HRGMv2_4320_34 | HRGMv2_4320_34_2 | 1079 | 3127 | + | CBM23 | GH26 |
| TC | HRGMv2_4320_34 | HRGMv2_4320_34_3 | 3348 | 5813 | + | 1.B.52.2.2 |
Gene ID: HRGMv2_4320_34_1
Type: CAZyme
Location: 3 - 878 (+)
Type: CAZyme
Location: 3 - 878 (+)
Gene ID: HRGMv2_4320_34_2
Type: CAZyme
Location: 1079 - 3127 (+)
Type: CAZyme
Location: 1079 - 3127 (+)
Gene ID: HRGMv2_4320_34_3
Type: TC
Location: 3348 - 5813 (+)
Type: TC
Location: 3348 - 5813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.