Cluster: HRGMv2_4320_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4320
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4320_27 | HRGMv2_4320_27_3 | 2646 | 4133 | + | CBM91 | GH43_12 |
| TC | HRGMv2_4320_27 | HRGMv2_4320_27_4 | 4148 | 4987 | - | 3.A.1.1.27 |
| TC | HRGMv2_4320_27 | HRGMv2_4320_27_5 | 4984 | 6282 | - | 3.A.1.1.27 |
| STP | HRGMv2_4320_27 | HRGMv2_4320_27_6 | 6293 | 7729 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4320_27 | HRGMv2_4320_27_7 | 7771 | 9495 | - | CBM34 | GH13_20 |
| TF | HRGMv2_4320_27 | HRGMv2_4320_27_8 | 9597 | 10394 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_4320_27 | HRGMv2_4320_27_9 | 10406 | 11545 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4320_27 | HRGMv2_4320_27_10 | 11729 | 13918 | - | 3.A.3.5.15 |
| STP | HRGMv2_4320_27 | HRGMv2_4320_27_11 | 13915 | 14304 | - | HMA |
| pfam | HRGMv2_4320_27 | HRGMv2_4320_27_12 | 14329 | 14640 | - | Trns_repr_metal |
| TC | HRGMv2_4320_27 | HRGMv2_4320_27_13 | 14730 | 16418 | - | 3.A.1.129.1 |
| TC | HRGMv2_4320_27 | HRGMv2_4320_27_14 | 16415 | 17269 | - | 3.A.1.112.9 |
| TC | HRGMv2_4320_27 | HRGMv2_4320_27_15 | 17266 | 18165 | - | 3.A.1.106.12 |
Gene ID: HRGMv2_4320_27_3
Type: CAZyme
Location: 2646 - 4133 (+)
Type: CAZyme
Location: 2646 - 4133 (+)
Gene ID: HRGMv2_4320_27_4
Type: TC
Location: 4148 - 4987 (-)
Type: TC
Location: 4148 - 4987 (-)
Gene ID: HRGMv2_4320_27_5
Type: TC
Location: 4984 - 6282 (-)
Type: TC
Location: 4984 - 6282 (-)
Gene ID: HRGMv2_4320_27_6
Type: STP
Location: 6293 - 7729 (-)
Type: STP
Location: 6293 - 7729 (-)
Gene ID: HRGMv2_4320_27_7
Type: CAZyme
Location: 7771 - 9495 (-)
Type: CAZyme
Location: 7771 - 9495 (-)
Gene ID: HRGMv2_4320_27_8
Type: TF
Location: 9597 - 10394 (+)
Type: TF
Location: 9597 - 10394 (+)
Gene ID: HRGMv2_4320_27_9
Type:
Location: 10406 - 11545 (-)
Type:
Location: 10406 - 11545 (-)
Gene ID: HRGMv2_4320_27_10
Type: TC
Location: 11729 - 13918 (-)
Type: TC
Location: 11729 - 13918 (-)
Gene ID: HRGMv2_4320_27_11
Type: STP
Location: 13915 - 14304 (-)
Type: STP
Location: 13915 - 14304 (-)
Gene ID: HRGMv2_4320_27_12
Type: pfam
Location: 14329 - 14640 (-)
Type: pfam
Location: 14329 - 14640 (-)
Gene ID: HRGMv2_4320_27_13
Type: TC
Location: 14730 - 16418 (-)
Type: TC
Location: 14730 - 16418 (-)
Gene ID: HRGMv2_4320_27_14
Type: TC
Location: 16415 - 17269 (-)
Type: TC
Location: 16415 - 17269 (-)
Gene ID: HRGMv2_4320_27_15
Type: TC
Location: 17266 - 18165 (-)
Type: TC
Location: 17266 - 18165 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Petralouisia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.