dbCAN Logo

Cluster: HRGMv2_4320_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4320_3 HRGMv2_4320_3_3 1538 3346 - 8.A.59.2.1
STP HRGMv2_4320_3 HRGMv2_4320_3_4 3348 4946 - SBP_bac_1
TC HRGMv2_4320_3 HRGMv2_4320_3_5 5089 5916 - 3.A.1.1.20
TC HRGMv2_4320_3 HRGMv2_4320_3_6 5921 6847 - 3.A.1.1.23
STP HRGMv2_4320_3 HRGMv2_4320_3_7 6907 8292 - SBP_bac_1
CAZyme HRGMv2_4320_3 HRGMv2_4320_3_8 8422 9747 - GH30_1
NULL(UNKNOWN) HRGMv2_4320_3 HRGMv2_4320_3_9 9784 10182 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4320_3 HRGMv2_4320_3_10 10186 13269 - GH161
CAZyme HRGMv2_4320_3 HRGMv2_4320_3_11 13290 15980 - GH94
CAZyme HRGMv2_4320_3 HRGMv2_4320_3_12 15994 17784 - GH55_1
Gene ID: HRGMv2_4320_3_3
Type: TC
Location: 1538 - 3346 (-)
Gene ID: HRGMv2_4320_3_4
Type: STP
Location: 3348 - 4946 (-)
Gene ID: HRGMv2_4320_3_5
Type: TC
Location: 5089 - 5916 (-)
Gene ID: HRGMv2_4320_3_6
Type: TC
Location: 5921 - 6847 (-)
Gene ID: HRGMv2_4320_3_7
Type: STP
Location: 6907 - 8292 (-)
Gene ID: HRGMv2_4320_3_8
Type: CAZyme
Location: 8422 - 9747 (-)
Gene ID: HRGMv2_4320_3_9
Type:
Location: 9784 - 10182 (-)
Gene ID: HRGMv2_4320_3_10
Type: CAZyme
Location: 10186 - 13269 (-)
Gene ID: HRGMv2_4320_3_11
Type: CAZyme
Location: 13290 - 15980 (-)
Gene ID: HRGMv2_4320_3_12
Type: CAZyme
Location: 15994 - 17784 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Petralouisia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List