Cluster: HRGMv2_4319_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4319
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_154 | HRGMv2_4319_154_1 | 3 | 986 | + | CBM35inCE17 | CE17 |
| CAZyme | HRGMv2_4319_154 | HRGMv2_4319_154_2 | 1039 | 3369 | + | GH1 |
| pfam | HRGMv2_4319_154 | HRGMv2_4319_154_3 | 3374 | 3547 | + | DUF4250 |
| pfam | HRGMv2_4319_154 | HRGMv2_4319_154_4 | 3540 | 4802 | + | RACo_C_ter | RACo_C_ter | Raco_middle |
| TC | HRGMv2_4319_154 | HRGMv2_4319_154_5 | 4935 | 7136 | + | 1.B.52.2.1 |
Gene ID: HRGMv2_4319_154_1
Type: CAZyme
Location: 3 - 986 (+)
Type: CAZyme
Location: 3 - 986 (+)
Gene ID: HRGMv2_4319_154_2
Type: CAZyme
Location: 1039 - 3369 (+)
Type: CAZyme
Location: 1039 - 3369 (+)
Gene ID: HRGMv2_4319_154_3
Type: pfam
Location: 3374 - 3547 (+)
Type: pfam
Location: 3374 - 3547 (+)
Gene ID: HRGMv2_4319_154_4
Type: pfam
Location: 3540 - 4802 (+)
Type: pfam
Location: 3540 - 4802 (+)
Gene ID: HRGMv2_4319_154_5
Type: TC
Location: 4935 - 7136 (+)
Type: TC
Location: 4935 - 7136 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.