Cluster: HRGMv2_4319_CGC52
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_02193
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4319_131 | HRGMv2_4319_131_2 | 303 | 1241 | - | 3.A.1.1.10 |
| STP | HRGMv2_4319_131 | HRGMv2_4319_131_3 | 1314 | 3068 | - | SBP_bac_1 |
| TF | HRGMv2_4319_131 | HRGMv2_4319_131_4 | 3245 | 5539 | - | HTH_AraC |
| TC | HRGMv2_4319_131 | HRGMv2_4319_131_5 | 5643 | 6683 | - | 4.D.2.1.5 |
| NULL(UNKNOWN) | HRGMv2_4319_131 | HRGMv2_4319_131_6 | 6676 | 7251 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4319_131 | HRGMv2_4319_131_7 | 7297 | 8328 | - | GT2 |
Gene ID: HRGMv2_4319_131_2
Type: TC
Location: 303 - 1241 (-)
Type: TC
Location: 303 - 1241 (-)
Gene ID: HRGMv2_4319_131_3
Type: STP
Location: 1314 - 3068 (-)
Type: STP
Location: 1314 - 3068 (-)
Gene ID: HRGMv2_4319_131_4
Type: TF
Location: 3245 - 5539 (-)
Type: TF
Location: 3245 - 5539 (-)
Gene ID: HRGMv2_4319_131_5
Type: TC
Location: 5643 - 6683 (-)
Type: TC
Location: 5643 - 6683 (-)
Gene ID: HRGMv2_4319_131_6
Type:
Location: 6676 - 7251 (-)
Type:
Location: 6676 - 7251 (-)
Gene ID: HRGMv2_4319_131_7
Type: CAZyme
Location: 7297 - 8328 (-)
Type: CAZyme
Location: 7297 - 8328 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.