Cluster: HRGMv2_4319_CGC50
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00259
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_122 | HRGMv2_4319_122_1 | 1 | 1503 | - | GH154 |
| CAZyme | HRGMv2_4319_122 | HRGMv2_4319_122_2 | 1551 | 2723 | - | GH88 |
| CAZyme | HRGMv2_4319_122 | HRGMv2_4319_122_3 | 2782 | 5037 | - | GH59 |
| TC | HRGMv2_4319_122 | HRGMv2_4319_122_4 | 5300 | 6205 | + | 3.A.1.1.10 |
| TC | HRGMv2_4319_122 | HRGMv2_4319_122_5 | 6216 | 7109 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_4319_122_1
Type: CAZyme
Location: 1 - 1503 (-)
Type: CAZyme
Location: 1 - 1503 (-)
Gene ID: HRGMv2_4319_122_2
Type: CAZyme
Location: 1551 - 2723 (-)
Type: CAZyme
Location: 1551 - 2723 (-)
Gene ID: HRGMv2_4319_122_3
Type: CAZyme
Location: 2782 - 5037 (-)
Type: CAZyme
Location: 2782 - 5037 (-)
Gene ID: HRGMv2_4319_122_4
Type: TC
Location: 5300 - 6205 (+)
Type: TC
Location: 5300 - 6205 (+)
Gene ID: HRGMv2_4319_122_5
Type: TC
Location: 6216 - 7109 (+)
Type: TC
Location: 6216 - 7109 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.