Cluster: HRGMv2_4319_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00462
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4319_103 | HRGMv2_4319_103_2 | 584 | 1537 | + | 3.A.1.1.29 |
| TC | HRGMv2_4319_103 | HRGMv2_4319_103_3 | 1551 | 2483 | + | 3.A.1.1.29 |
| STP | HRGMv2_4319_103 | HRGMv2_4319_103_4 | 2568 | 4295 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4319_103 | HRGMv2_4319_103_5 | 4559 | 5611 | + | GH105 |
| CAZyme | HRGMv2_4319_103 | HRGMv2_4319_103_6 | 5614 | 7413 | + | CE12 |
| CAZyme | HRGMv2_4319_103 | HRGMv2_4319_103_7 | 7434 | 9587 | + | GH112 |
Gene ID: HRGMv2_4319_103_2
Type: TC
Location: 584 - 1537 (+)
Type: TC
Location: 584 - 1537 (+)
Gene ID: HRGMv2_4319_103_3
Type: TC
Location: 1551 - 2483 (+)
Type: TC
Location: 1551 - 2483 (+)
Gene ID: HRGMv2_4319_103_4
Type: STP
Location: 2568 - 4295 (+)
Type: STP
Location: 2568 - 4295 (+)
Gene ID: HRGMv2_4319_103_5
Type: CAZyme
Location: 4559 - 5611 (+)
Type: CAZyme
Location: 4559 - 5611 (+)
Gene ID: HRGMv2_4319_103_6
Type: CAZyme
Location: 5614 - 7413 (+)
Type: CAZyme
Location: 5614 - 7413 (+)
Gene ID: HRGMv2_4319_103_7
Type: CAZyme
Location: 7434 - 9587 (+)
Type: CAZyme
Location: 7434 - 9587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.