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Cluster: HRGMv2_4319_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4319_96 HRGMv2_4319_96_1 2 1288 + GH25
pfam HRGMv2_4319_96 HRGMv2_4319_96_2 1492 2043 + dTDP_sugar_isom
TC HRGMv2_4319_96 HRGMv2_4319_96_3 2013 3056 + 3.A.1.104.1
pfam HRGMv2_4319_96 HRGMv2_4319_96_4 3080 4597 + DUF6056
TC HRGMv2_4319_96 HRGMv2_4319_96_5 4602 5879 + 3.A.1.103.6
pfam HRGMv2_4319_96 HRGMv2_4319_96_6 5895 7979 + PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme HRGMv2_4319_96 HRGMv2_4319_96_7 8002 9861 + GT2
CAZyme HRGMv2_4319_96 HRGMv2_4319_96_8 9882 11990 + GT2
Gene ID: HRGMv2_4319_96_1
Type: CAZyme
Location: 2 - 1288 (+)
Gene ID: HRGMv2_4319_96_2
Type: pfam
Location: 1492 - 2043 (+)
Gene ID: HRGMv2_4319_96_3
Type: TC
Location: 2013 - 3056 (+)
Gene ID: HRGMv2_4319_96_4
Type: pfam
Location: 3080 - 4597 (+)
Gene ID: HRGMv2_4319_96_5
Type: TC
Location: 4602 - 5879 (+)
Gene ID: HRGMv2_4319_96_6
Type: pfam
Location: 5895 - 7979 (+)
Gene ID: HRGMv2_4319_96_7
Type: CAZyme
Location: 8002 - 9861 (+)
Gene ID: HRGMv2_4319_96_8
Type: CAZyme
Location: 9882 - 11990 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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