Cluster: HRGMv2_4319_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4319_83 | HRGMv2_4319_83_4 | 2103 | 3473 | + | 3.A.1.1.36 |
| TC | HRGMv2_4319_83 | HRGMv2_4319_83_5 | 3595 | 4461 | + | 3.A.1.1.36 |
| TC | HRGMv2_4319_83 | HRGMv2_4319_83_6 | 4461 | 5300 | + | 3.A.1.1.20 |
| TF | HRGMv2_4319_83 | HRGMv2_4319_83_7 | 5319 | 6236 | + | HTH_5 |
| CAZyme | HRGMv2_4319_83 | HRGMv2_4319_83_8 | 6266 | 7978 | + | GH2 |
| CAZyme | HRGMv2_4319_83 | HRGMv2_4319_83_9 | 7975 | 10197 | + | GH65 |
Gene ID: HRGMv2_4319_83_4
Type: TC
Location: 2103 - 3473 (+)
Type: TC
Location: 2103 - 3473 (+)
Gene ID: HRGMv2_4319_83_5
Type: TC
Location: 3595 - 4461 (+)
Type: TC
Location: 3595 - 4461 (+)
Gene ID: HRGMv2_4319_83_6
Type: TC
Location: 4461 - 5300 (+)
Type: TC
Location: 4461 - 5300 (+)
Gene ID: HRGMv2_4319_83_7
Type: TF
Location: 5319 - 6236 (+)
Type: TF
Location: 5319 - 6236 (+)
Gene ID: HRGMv2_4319_83_8
Type: CAZyme
Location: 6266 - 7978 (+)
Type: CAZyme
Location: 6266 - 7978 (+)
Gene ID: HRGMv2_4319_83_9
Type: CAZyme
Location: 7975 - 10197 (+)
Type: CAZyme
Location: 7975 - 10197 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.