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Cluster: HRGMv2_4319_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4319_67 HRGMv2_4319_67_3 1835 3211 + GH4
pfam HRGMv2_4319_67 HRGMv2_4319_67_4 3228 3980 + Glucosamine_iso
STP HRGMv2_4319_67 HRGMv2_4319_67_5 4030 5394 + SBP_bac_1
TC HRGMv2_4319_67 HRGMv2_4319_67_6 5433 6314 + 3.A.1.1.47
TC HRGMv2_4319_67 HRGMv2_4319_67_7 6326 7168 + 3.A.1.1.47
CAZyme HRGMv2_4319_67 HRGMv2_4319_67_8 7236 8579 + GH30_1
CAZyme HRGMv2_4319_67 HRGMv2_4319_67_9 8843 14737 + CE12 | PL11_1
TC HRGMv2_4319_67 HRGMv2_4319_67_10 14885 15604 + 8.A.59.4.1
Gene ID: HRGMv2_4319_67_3
Type: CAZyme
Location: 1835 - 3211 (+)
Gene ID: HRGMv2_4319_67_4
Type: pfam
Location: 3228 - 3980 (+)
Gene ID: HRGMv2_4319_67_5
Type: STP
Location: 4030 - 5394 (+)
Gene ID: HRGMv2_4319_67_6
Type: TC
Location: 5433 - 6314 (+)
Gene ID: HRGMv2_4319_67_7
Type: TC
Location: 6326 - 7168 (+)
Gene ID: HRGMv2_4319_67_8
Type: CAZyme
Location: 7236 - 8579 (+)
Gene ID: HRGMv2_4319_67_9
Type: CAZyme
Location: 8843 - 14737 (+)
Gene ID: HRGMv2_4319_67_10
Type: TC
Location: 14885 - 15604 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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