Cluster: HRGMv2_4319_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_63 | HRGMv2_4319_63_1 | 3 | 863 | - | GH88 |
| STP | HRGMv2_4319_63 | HRGMv2_4319_63_2 | 987 | 2702 | - | SBP_bac_1 |
| TC | HRGMv2_4319_63 | HRGMv2_4319_63_3 | 2728 | 3606 | - | 3.A.1.1.29 |
| TC | HRGMv2_4319_63 | HRGMv2_4319_63_4 | 3618 | 4523 | - | 3.A.1.1.10 |
| TF | HRGMv2_4319_63 | HRGMv2_4319_63_5 | 4663 | 6090 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4319_63 | HRGMv2_4319_63_6 | 6093 | 7883 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_4319_63_1
Type: CAZyme
Location: 3 - 863 (-)
Type: CAZyme
Location: 3 - 863 (-)
Gene ID: HRGMv2_4319_63_2
Type: STP
Location: 987 - 2702 (-)
Type: STP
Location: 987 - 2702 (-)
Gene ID: HRGMv2_4319_63_3
Type: TC
Location: 2728 - 3606 (-)
Type: TC
Location: 2728 - 3606 (-)
Gene ID: HRGMv2_4319_63_4
Type: TC
Location: 3618 - 4523 (-)
Type: TC
Location: 3618 - 4523 (-)
Gene ID: HRGMv2_4319_63_5
Type: TF
Location: 4663 - 6090 (+)
Type: TF
Location: 4663 - 6090 (+)
Gene ID: HRGMv2_4319_63_6
Type: TC
Location: 6093 - 7883 (+)
Type: TC
Location: 6093 - 7883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.